![]() For users - Fiji is easy to install and has an automatic update function, bundles a lot of plugins and offers comprehensive documentation. Chat logs from these channels can be downloaded from here. Fiji is an image processing packagea 'batteries-included' distribution of ImageJ, bundling a lot of plugins which facilitate scientific image analysis. But active core developers of ImageJ-related projects have not monitored these rooms for many years, and since the Freenode “hostile takeover” of 2021, the rooms might not even exist anymore. Before that, some community members frequented IRC on in the #imagejdev and #fiji-devel chat rooms. But these Gitter chat rooms are no longer actively monitored. For several years, developers of SciJava-based software discussed day-to-day development issues using the Gitter chat service. Several ImageJ-related projects have channels on the Image.sc Zulip instance: Logo It is a nice way to discuss things with the ImageJ community in real time. Zulip is an open-source alternative to Slack and similar tools. day-to-day project logistics, or time-sensitive discussion that will become less relevant after the fact. My topic is something less important to preserve as part of the community knowledge base: e.g. step 3: and again i click on more, specify and it turns that my values changed. step 1: Then I go to : ROI manager>click on more>specify, and choose width and height 315 for both (i use scaled units) step 2: to check if my units applied, I click on the list. We try our best to be friendly! But if you are allergic to forums, and only chat sustains you, then go ahead and post on Zulip. I am doing a square with the rectangle function. Posting on the Image.sc Forum is too scary! Image.sc Forum, Job Opportunities category I have a job opening to advertise in the field. I have an announcement for the community. I want to discuss the ImageJ wiki (this website). I need help programming with the software tools. The macro will open in an ImageJ macro editor window (named Clipboard) that has a Debug menu. A1: (Wayne Rasband) Open the macro in the Fiji Script Editor, type cmd-A (Select All), cmd-C (Copy), close the Script Editor and type cmd-V (Paste). Here is a guide for when to use the Image.sc Forum versus chat services: Situation I’ve also tried starting the debug mode by using D, or or D, etc. The code for the Shiny app can be downloaded. ![]() imageSaved, which was added as a default method that does nothing to ensure backwards compatibility. The motivation was adding more methods to the ij.ImageListener interface, e.g. Public, so that others may also benefit long into the future. Fiji plugin (Schindelin et al., 2012a) combined with an R shiny app (R-Core. As of this week, ImageJ 1.53h17 requires java 8 or higher. The contract of the community is:Įxperts give their time for free-but in exchange, that help is Most of the ImageJ community’s image analysis experts monitor the Image.scįorum, not live chat rooms. ![]() That that discussion had happened in chat instead-would you have found If you’d like to help, check out the how to help guide This plugin binarises 8 and 16-bit images using various global (histogram-derived) thresholding methods. The content of this page has not been vetted since shifting away from MediaWiki. Have you ever found the answer to a question on ? Now suppose This page describes content relating to the Fiji distribution of ImageJ. The community, providing a searchable history of questions and solutions. I (and at least a couple others) have been able to run Fiji/ImageJ native by installing a no JRE version combined with a native JRE. I want to focus on native arm64 only, as this offers greater performance. I don’t know if this is very difficult to develop or not.Use the Image.sc Forum, rather than chat rooms,Ĭonversations in chat will be less discoverable later than those on the I think this platform is here to staydisclosure, I own an M1 MBPro. I have been testing with the Acquisition plugins:īut none of them are compatible with the camera of my microscope (for instance, Webcam Capture display shows “No webcam detected”), so I don’t know if I could create a plugin for ImageJ or Fiji with a Java library that is capable of recognizing the camera integrated in the microscope. But it is very limited when it comes to exporting these results (it has no function of exporting to spreadsheets or even copying the results …). This brand has by default a software with multiple functions to obtain results of area, perimeter, etc. I would like to know if there is any way to display or capture the video from the camera of my Optika Italy microscope in real time.
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